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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015883265.1_cds_XP_016438410.1_34073
CDS Infomation

[gene=LOC107764370] [db_xref=GeneID:107764370] [protein=probable protein phosphatase 2C 12 isoform X2] [protein_id=XP_016438410.1] [location=join(6885..7082,7880..7991,8271..8424,8513..8576,8807..8914,9776..9901,10001..10236,10347..10549,10629..10657)] [gbkey=CDS]
Sequence

ATGTTGTCCAAGGGTGAACATCAAACGGTCCCATTGTCTGTATTGCTGAAAAGGGAACTG
GCCAATGAGAAGATTGAAAGGCCCGAGATTTCTCACGGTCAAGCTAGTCAGAGCAAGAAA
GGGGAAGACTTCACCTTCCTCAAGACCGAATGCCAGCGGGTTTTGGGAGATGGAGTTACT
ACCTTTTCTGTTTTTGGGAATGTCTTGAGTGCTATTCCCTCAGACCTCAACAGAGATGAG
TGGGTTGCAGCATTGCCTAGGGCTTTGGTTGCAGGATTCGTCAAGACAGACAAAGAATTC
CAAGAAAAAGCACAGAAATCAGGGACAACAGTCACGTTCGTTATAATTGAAGGATGGGTT
GTAACAGTTGCTTCAGTTGGCGATTCTCGATGTATATTAGAATCTGCTGAAGGGGGAATT
TATTATCTATCAGCTGATCATAGACTAGAGTGCAATGAAGAGGAGAGGGAACGCATAACA
ACAAGTGGTGGAGAGGTTGGTCGGCTTAATACTGGTGGTGGAACACAGATTGGTCCTTTG
AGATGTTGGCCTGGTGGGTTATGCCTCTCTCGATCCATTGGAGATATGGATGTTGGCGAG
TTCATTGTTCCTGTACCCTATGTAAAGCAAGTAAAGCTATCTTCAGCAGGTGGAAGGCTT
GTAATAGCAAGCGATGGTGTCTGGGATGCTTTGTCTGCAGAAATGGCTGTAGAATGTTGT
CGTGGAATGCCTCCGGATGCTGCAGCTTCTCAAATTGTTAAGGAAGCCGTGCAGCCAAAA
GGGATTCGAGATGACACTACCTGTATTGTGGTTGATATACAGCCCCCAGAAAAGCCAAAT
CCTCCCCAGCCACCACCCAAAAAGTCAGGGAAGAAAGTGTTTAAGTCTATATTTCGCAAA
ATAACATCCGAGTCATCTTCTAATACTGAGAGAGATTATGATGAACCAGATGTTGTGGAA
GAACTATTTGAGGAAGGATCTGCATCACTTTCTGACAGGTTAGATACTAAGTATCCAGTT
TGCAACATGTTTAAGTTATTCATGTGTGCCGTCTGTCAAGTAGAGATAAAACCTGGAGAA
GGTATTTCAATACATGCTGGCTCTTTGAATACAAGAAATGCTCGTCCATGGGATGGCCCT
TTCCTTTGCTCAAGCTGCCAAGTGAAGAAAGAAGCCATGGAAGGAAAAAGACCTTCCGGA
AATGGAAGATATAGTAGTGACAGCGACTAG

Peptide Sequence

PEP ID

XP_016438410.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 12 isoform X2 [Nicotiana tabacum]
Sequence

MLSKGEHQTVPLSVLLKRELANEKIERPEISHGQASQSKKGEDFTFLKTECQRVLGDGVT
TFSVFGNVLSAIPSDLNRDEWVAALPRALVAGFVKTDKEFQEKAQKSGTTVTFVIIEGWV
VTVASVGDSRCILESAEGGIYYLSADHRLECNEEERERITTSGGEVGRLNTGGGTQIGPL
RCWPGGLCLSRSIGDMDVGEFIVPVPYVKQVKLSSAGGRLVIASDGVWDALSAEMAVECC
RGMPPDAAASQIVKEAVQPKGIRDDTTCIVVDIQPPEKPNPPQPPPKKSGKKVFKSIFRK
ITSESSSNTERDYDEPDVVEELFEEGSASLSDRLDTKYPVCNMFKLFMCAVCQVEIKPGE
GISIHAGSLNTRNARPWDGPFLCSSCQVKKEAMEGKRPSGNGRYSSDSD

Transcript Sequence

Gene sequence data has not been registered.